I liked the ingame ending. Of course, nothing will ever be able to compare to KH2FM SE, not even BbS SE, you just can't compare the actual scene, which was in regular graphics, and had characters we knew, to the SE, in full CGI, and when we first saw it, had no idea what the fuck was going on.
In short, its unfair to compare the ingame ending, or anything, to the SE.